plotFPKMBoxplot: plot RPKM boxplot
In AlexHelloWorld/DifferentialAndSurvivalAnalysis:
Description
Usage
Arguments
Value
Description
plot RPKM boxplot
Usage
1
2
plotFPKMBoxplot(FPKMTable, coldata, geneInfo, attribute, geneName = "",
geneId = "")
Arguments
FPKMTable
FPKM matrix
coldata
an annotation table for samples, must include attributes naming "barcode", "patient_barcode", "survival", "vital_status", "total_count", "cohort"
geneInfo
an annotation table for genes, must include attribute nameing "gene_length"
attribute
attribute used to group data (x axis)
geneName
the name of gene to draw boxplot
geneId
the Id of gene to draw boxplot
Value
boxplot of FPKM by ggplot2
AlexHelloWorld/DifferentialAndSurvivalAnalysis documentation built on June 1, 2019, 3:51 a.m.
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Description Usage Arguments Value
Description
plot RPKM boxplot
Usage
1 2 | plotFPKMBoxplot(FPKMTable, coldata, geneInfo, attribute, geneName = "",
geneId = "")
|
Arguments
FPKMTable |
FPKM matrix |
coldata |
an annotation table for samples, must include attributes naming "barcode", "patient_barcode", "survival", "vital_status", "total_count", "cohort" |
geneInfo |
an annotation table for genes, must include attribute nameing "gene_length" |
attribute |
attribute used to group data (x axis) |
geneName |
the name of gene to draw boxplot |
geneId |
the Id of gene to draw boxplot |
Value
boxplot of FPKM by ggplot2
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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