AliSajid/KINNET: Kinase INteraction NETwork Generation

This package provides the functionality to process PamGene's PamChip Data Output and generate kinase interaction networks from that. This project uses a bayesian algorithm to generate bayesian networks for defining dependence relationships between peptide sequences in the PamChip data. It then uses a novel kinase assignment method to assign upstream kinases to each peptide which is then output as a graph.

install.packages("remotes")
remotes::install_github("AliSajid/KINNET")