stk_accessors: STK Data Accessor Functions

In AliSajid/KINNET: Kinase INteraction NETwork Generation

Description

These functions provide a variety of data setters and getter for the Pamchip objects.

Usage

pheno_data(chipdata, ...)

## S4 method for signature ''PamchipData-STK''
pheno_data(chipdata)

exp_data(chipdata, ...)

## S4 method for signature ''PamchipData-STK''
exp_data(chipdata)

classes(chipdata, ...)

## S4 method for signature ''PamchipData-STK''
classes(chipdata)

peptides(chipdata, ...)

## S4 method for signature ''PamchipData-STK''
peptides(chipdata)

Arguments

chipdata	an object of class PamchipData-STK or PamchipData-PTK
...	Currently unused

Details

These functions allow you to get and set the slots of the object.

• processed_data accesses the processed and transformed data

• pheno_data gives the sample characteristics

• exp_data access the actual intensity values

• classes gives the unique classes in the chip

• peptides gives the reference list of peptides on the chip

Value

The requested object

AliSajid/KINNET documentation built on Jan. 17, 2022, 8:54 a.m.