update_probability_matrix: Calculated Updated Probabilities of each peptide/kinase pair
In AliSajid/KINNET: Kinase INteraction NETwork Generation
Description
Usage
Arguments
Value
Examples
View source: R/update_probability_matrix.R
Description
Calculated Updated Probabilities of each peptide/kinase pair
Usage
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update_probability_matrix(
chiptype,
assignment_df,
identifier = "Gene_Symbol",
guided = NULL
)
Arguments
chiptype
character. Either "STK" or "PTK"
assignment_df
tbl_df. A tibble with the potential kianse assignments
identifier
The identifier to use in outputs. Can be either "Gene_Symbol" or "Kinase"
guided
A vector of Kinases or Gene_Symbols that must be included in the network. The vector must be aligned with what was specified in _identifier_
Value
an updated dataframe with the probabilities
Examples
1
AliSajid/KINNET documentation built on Jan. 17, 2022, 8:54 a.m.
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Description Usage Arguments Value Examples
View source: R/update_probability_matrix.R
Description
Calculated Updated Probabilities of each peptide/kinase pair
Usage
1 2 3 4 5 6 | update_probability_matrix(
chiptype,
assignment_df,
identifier = "Gene_Symbol",
guided = NULL
)
|
Arguments
chiptype |
character. Either "STK" or "PTK" |
assignment_df |
tbl_df. A tibble with the potential kianse assignments |
identifier |
The identifier to use in outputs. Can be either "Gene_Symbol" or "Kinase" |
guided |
A vector of Kinases or Gene_Symbols that must be included in the network. The vector must be aligned with what was specified in _identifier_ |
Value
an updated dataframe with the probabilities
Examples
1 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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