Description Usage Arguments Value Examples
View source: R/assign_kinases.R
Assign kinases, given a network and a chip type and additional essential kinases
1 2 3 4 5 6 | assign_kinases_guided(
network,
chiptype,
identifier = "Gene_Symbol",
guided = NULL
)
|
network |
A network output from bnlearn |
chiptype |
Either PTK or STK |
identifier |
The identifier to use in outputs. Can be either "Gene_Symbol" or "Kinase" |
guided |
A vector of Kinases or Gene_Symbols that must be included in the network. The vector must be aligned with what was specified in _identifier_ |
A dataframe with upstream kinases assigned to the peptide
1 |
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