assign_kinases_guided: Assign kinases, given a network and a chip type and...

Description Usage Arguments Value Examples

View source: R/assign_kinases.R

Description

Assign kinases, given a network and a chip type and additional essential kinases

Usage

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assign_kinases_guided(
  network,
  chiptype,
  identifier = "Gene_Symbol",
  guided = NULL
)

Arguments

network

A network output from bnlearn

chiptype

Either PTK or STK

identifier

The identifier to use in outputs. Can be either "Gene_Symbol" or "Kinase"

guided

A vector of Kinases or Gene_Symbols that must be included in the network. The vector must be aligned with what was specified in _identifier_

Value

A dataframe with upstream kinases assigned to the peptide

Examples

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AliSajid/KINNET documentation built on Jan. 17, 2022, 8:54 a.m.