pxgplot_par: Plot the phenotype by genotype split at each peak marker in a...

In AndersenLab/linkagemapping2: Functions for the Mapping of Andersen Lab RIAILs and RILs using qtl2

Description

Plot the phenotype by genotype split at each peak marker in a mapping next to parental phenotype split

Usage

pxgplot_par(cross, map, phenoframe, parent = "N2xCB4856")

Arguments

cross	The cross object used for the mapping
map	The mapping output for a single trait
phenoframe	The dataframe used to make the cross object
parent	The parental cross, either "N2xCB4856" (default), "N2xLSJ2", or "AF16xHK104"

Value

A boxplot of the phenotype by genotype split at each peak marker in a mapping, including parental phenotypes

AndersenLab/linkagemapping2 documentation built on May 3, 2019, 8:32 p.m.