plot_sim: plot simulation results for newest flexible config driven...

In AndySouth/resistanceGame: prototyping an insecticide resistance management computer game

Description

plot insecticide use and resulting changes in population and resistance

Usage

plot_sim(l_time, plot_emergence = TRUE, plot_thresholds = TRUE,
  verbose = FALSE, time_label = "weeks", plot_type = "month",
  plot_resist = "mortality", leg_pos = "bottomleft", title = NULL)

Arguments

l_time	list containing simulation results
plot_emergence	whether to add emergence rate to population plot
plot_thresholds	whether to add WHO resistance threholds to resistance plot
verbose	whether to output diagnostics to console
time_label	time label to add to x axis, default='weeks'
plot_type	'month' to just plot points per month, '6month' to plot 6months
plot_resist	'frequency' or 'mortality'
leg_pos	legend position defaults to 'bottomleft', other combinations of 'top','right' etc.
title	plot title added at top

Value

maybe nothing, produces a plot

Examples

#blank plot
l_time <- init_sim(20)
plot_sim(l_time)
#default run
plot_sim( run_sim())
#modify params
plot_sim( run_sim( insecticide_kill = 0.3, resist_incr = 0.05 ))

AndySouth/resistanceGame documentation built on May 5, 2019, 6:01 a.m.