Description Usage Arguments Value Examples
some params driven by config file, others by function args
1 2 3 4 | run_sim_oldcc(num_tsteps = 20, pop_start = 0.5, resist_freq_start = 0.1,
rate_growth = 0.2, carry_cap = 1, insecticide_kill = 0.2,
resistance_modifier = 1, resist_incr = 0.2, resist_decr = 0.1,
l_config = NULL, randomness = 0, never_go_below = 0.01)
|
num_tsteps |
number of timesteps to run simulation |
pop_start |
start vector population |
resist_freq_start |
effect of resistance on insecticide kill rate |
rate_growth |
population growth rate |
carry_cap |
carrying capacity (K) in the logistic model |
insecticide_kill |
kill rate due to insecticide |
resistance_modifier |
modifies effect of resistance |
resist_incr |
increase in resistance when correct insecticide present |
resist_decr |
decrease in resistance when correct insecticide absent |
l_config |
list of config parameters |
randomness |
0-1 0=none, 1=maximum |
never_go_below |
restock at this level if pop goes below it |
list of simulation results
1 2 3 4 5 6 7 8 9 | l_time <- run_sim_oldcc(pop_start=0.5, resist_freq_start=0.2, rate_growth=0.4, carry_cap=1, insecticide_kill=0.4, resistance_modifier=1)
#plot default run
plot_sim_oldcc( run_sim_oldcc())
#modify params
plot_sim_oldcc( run_sim_oldcc( insecticide_kill = 0.3, resist_incr = 0.05 ))
#modify config file
l_config <- read_config()
l_config2 <- config_plan(l_config, t_strt=c(1,11), t_stop=c(10,20), control_id=c('irs_pyr','irs_ddt'))
plot_sim_oldcc( run_sim_oldcc(l_config=l_config2, resist_incr=0.1))
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