reads_demo_02: Forward reads and reverse reads in 'GRanges' format (for demo...

Description Usage Format Value See Also Examples

Description

A group of forward and reverse reads that can be used to test the rjmcmc function.

Usage

1

Format

A GRanges containing forward and reverse reads.

Value

A GRanges containing forward and reverse reads.

See Also

Examples

1
2
3
4
5
6
7
8
## Loading dataset
data(reads_demo_02)

## Nucleosome positioning
## Since there is only one chromosome present in reads_demo_02, the name
## of the chromosome does not need to be specified
rjmcmc(reads = reads_demo_02, nbrIterations = 150, lambda = 3, kMax = 30,
            minInterval = 144, maxInterval = 290, minReads = 6)

ArnaudDroitLab/RJMCMCNucleosomes documentation built on May 5, 2019, 7:06 a.m.