API for AurMad/STOCfree
STOC free model: prediction of probability of freedom from longitudinal data
| Global functions | |
|---|---|
| JAGS_monitor | Source code |
| STOCfree_JAGS | Man page Source code |
| STOCfree_JAGS_data | Man page Source code |
| STOCfree_JAGS_data.animal | Source code |
| STOCfree_JAGS_data.animal_dynLogit | Source code |
| STOCfree_JAGS_data.animal_dynLogit_rf | Source code |
| STOCfree_JAGS_data.animal_rf | Source code |
| STOCfree_JAGS_data.default | Source code |
| STOCfree_JAGS_data.herd | Source code |
| STOCfree_JAGS_data.herd_dynLogit | Source code |
| STOCfree_JAGS_data.herd_dynLogit_rf | Source code |
| STOCfree_JAGS_data.herd_rf | Source code |
| STOCfree_Stan | Man page Source code |
| STOCfree_Stan_data | Source code |
| STOCfree_Stan_data.default | Source code |
| STOCfree_Stan_data.herd | Source code |
| STOCfree_Stan_data.herd_dynLogit | Source code |
| STOCfree_Stan_data.herd_dynLogit_rf | Source code |
| STOCfree_Stan_data.herd_rf | Source code |
| STOCfree_data | Man page Source code |
| STOCfree_data_check | Source code |
| STOCfree_files | Source code |
| STOCfree_model_inits | Source code |
| add_risk_factor | Man page Source code |
| check_priors_status_dyn | Source code |
| date_from_lag | Man page Source code |
| dnorm_logit | Man page Source code |
| ess_STOCfree_param | Man page Source code |
| extract_STOCfree_month_prev | Man page Source code |
| extract_STOCfree_param | Man page Source code |
| extract_STOCfree_pred | Man page Source code |
| extract_herd_from_status_id | Man page Source code |
| f_summary | Source code |
| herdBTM | Man page |
| herd_summary | Man page Source code |
| intro | Man page |
| invlogit | Man page Source code |
| logit | Man page Source code |
| logit_nwinf | Man page Source code |
| logit_nwinf_lagged | Man page Source code |
| make_animal_test | Source code |
| make_dyn_prior_table | Source code |
| make_month_id | Man page Source code |
| make_nwinf_data | Man page Source code |
| new_STOCfree_month_prev | Source code |
| new_STOCfree_param | Source code |
| new_STOCfree_pred | Source code |
| param_summary | Man page Source code |
| plot.STOCfree_month_prev | Man page Source code |
| plot.STOCfree_param | Man page Source code |
| plot.STOCfree_pred | Man page Source code |
| plot_priors_rf | Man page Source code |
| plot_priors_status_dyn | Man page Source code |
| plot_priors_tests | Man page Source code |
| print.STOCfree_param | Man page Source code |
| print.STOCfree_pred | Man page Source code |
| read_STOCfree_month_prev | Man page Source code |
| read_STOCfree_param | Man page Source code |
| read_STOCfree_pred | Man page Source code |
| set_priors_rf | Man page Source code |
| set_priors_status_dyn | Man page Source code |
| set_priors_tests | Man page Source code |
| sf_add_risk_factor | Man page Source code |
| sf_remove_risk_factor | Man page Source code |
| show_priors_status_dyn | Man page Source code |
| show_rf | Man page Source code |
| show_tests | Man page Source code |
| summary.STOCfree_param | Man page Source code |
| summary.STOCfree_pred | Man page Source code |
| validate_STOCfree_month_prev | Source code |
| validate_STOCfree_param | Source code |
| validate_STOCfree_pred | Source code |
| write_JAGS_model | Man page Source code |
| write_JAGS_model.animal | Source code |
| write_JAGS_model.animal_dynLogit | Source code |
| write_JAGS_model.animal_dynLogit_rf | Source code |
| write_JAGS_model.animal_rf | Source code |
| write_JAGS_model.default | Source code |
| write_JAGS_model.herd | Source code |
| write_JAGS_model.herd_dynLogit | Source code |
| write_JAGS_model.herd_dynLogit_rf | Source code |
| write_JAGS_model.herd_rf | Source code |
| write_Stan_model | Man page Source code |
| write_Stan_model.default | Source code |
| write_Stan_model.herd | Source code |
| write_Stan_model.herd_dynLogit | Source code |
| write_Stan_model.herd_dynLogit_rf | Source code |
| write_Stan_model.herd_rf | Source code |
