Description Usage Arguments Value
Get the results from a canopy optimized run
1 2 3 4 5 6 7 8 9 10 11 12 13 | get_results_canopy(
cna.obj,
tree,
projectname,
path = ".",
path_mut = ".",
mut.files,
sample.names = NULL,
cex_cna = 5,
epsilon = 0,
cex_names = 1,
tree_ccf = FALSE
)
|
projectname |
Name of the project to save results. |
path |
Relative path to where results should be saved. Default is current directory. |
path_mut |
Relative path to the mutation files used to run canopy |
mut.files |
Mutation file names (same order as in the canopy run) |
sample.names |
Sample names for the files |
cex_cna |
size of font in CNA heatmap |
epsilon |
Segment aggregation |
cex_names |
name sizes |
tree_ccf |
should the tree CCF |
Results pdf
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