replacePattern: Replace pattern in all files in dir

In BaderLab/netDx: Network-based patient classifier

Description

find/replace pattern in all files of specified file type in specified directory. Needed to modify number format when intefacing with GeneMANIA, on French locale machines. Without this step, CacheBuilder throws error with commas.

Usage

replacePattern(pattern = ",", target = ".", path = getwd(), fileType = "txt$")

Arguments

pattern	(char) pattern to find
target	(char) pattern to replace
path	(char) dir to replace pattern in
fileType	(char) pattern for files to replace pattern in

Value

No value. Files have patterns replaced in place.

BaderLab/netDx documentation built on Sept. 26, 2021, 9:13 a.m.