blastHitText: Trim a blast hit description string to a particular length...

In BigelowLab/tetramers: Tetramer Analysis with Principle Component Analysis

Trim a blast hit description string to a particular length with it's associated hit score and accession name.

Description

Trim a blast hit description string to a particular length with it's associated hit score and accession name.

Usage

blastHitText(x, len = 30, hsp_bit_score_min = 75,
  noHitText = "no significant hits")

Arguments

x	blast tibble
len	numeric, the maximum output string length
hsp_bit_score_min	numeric, hits below this are flagged with noHitText
noHitText	the value to return for failed hits

Value

the tibble with an added column 'hit_tetxt'

BigelowLab/tetramers documentation built on April 3, 2022, 8:22 p.m.