write_tetra: Write all of the known results

View source: R/io.R

write_tetraR Documentation

Write all of the known results

Description

Write all of the known results

Usage

write_tetra(X, path = X$out_dir, what = c("input", "info", "count", "pca",
  "fail", "loading", "outliers"), verbose = FALSE)

Arguments

X

Tetramers-class object

path

the output path - created if it doesn't exist

what

character - a list of items to write

  • input the input FASTA file if it is available and doesn't already exist in path

  • info a dump of input parameters to a yaml

  • count tetramer counts

  • pca pca values

  • fail listing of failed tetramer windows

  • loading pca loading values

  • outliers table of outliers

verbose

logical, if TRUE then output messages


BigelowLab/tetramers documentation built on April 3, 2022, 8:22 p.m.