CalculateSaturationFor10x: Calculate Saturation For 10x
In BimberLab/cellhashR: A Package for Demultiplexing Cell Hashing Data
View source: R/Preprocessing.R
CalculateSaturationFor10x R Documentation
Calculate Saturation For 10x
Description
Calculate per-cell saturation for 10x data
Usage
CalculateSaturationFor10x(barcodeMatrix, molInfoFile, doPlot = TRUE)
Arguments
barcodeMatrix
The matrix holding HTO count data. The columns should match cells
molInfoFile
The 10x molecule_info.h5 file
doPlot
If true, plots summarizing saturation will be generated.
Value
A dataframe with the cellbarcode and per-cell saturation
BimberLab/cellhashR documentation built on March 20, 2024, 9:23 a.m.
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View source: R/Preprocessing.R
| CalculateSaturationFor10x | R Documentation |
Calculate Saturation For 10x
Description
Calculate per-cell saturation for 10x data
Usage
CalculateSaturationFor10x(barcodeMatrix, molInfoFile, doPlot = TRUE)
Arguments
barcodeMatrix |
The matrix holding HTO count data. The columns should match cells |
molInfoFile |
The 10x molecule_info.h5 file |
doPlot |
If true, plots summarizing saturation will be generated. |
Value
A dataframe with the cellbarcode and per-cell saturation
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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