bioacoustica.postTrait: Post trait data to BioAcoustica

In BioAcoustica/bioacousticaR: Provides access to the BioAcoustica platform through R

Description

A function to post bioacoustic traits to BioAcoustica.

Usage

bioacoustica.postTrait(taxon_name, c, call_type="", trait="", value="", temp="", sex="", annotation_id="", inference_notes="", cascade=0)

Arguments

taxon_name	Thetaxonomic name of the species the trait belongs to.
c	An authenticated CURL handle.
call_type	The type of call the trait applies to (e.g. calling song, rivalry song).
trait	The name of the trait being submitted.
value	The value of the trait being submitted.
temp	The temperature at which the trait was recorded.
sex	The sex of the individual the trait applies to.
annotation_id	The annotation ID used to calculate this trait, if applicable.
inference_notes	String describing how the trait was infered, if applicable.
cascade	If set to 1 the BioAcoustica inference bot will aplly this trait to child taxa of this taxon.

Author(s)

Ed Baker

Examples

##---- Should be DIRECTLY executable !! ----
##-- ==>  Define data, use random,
##--	or do  help(data=index)  for the standard data sets.

## The function is currently defined as
function(taxon_name, c, call_type=NULL, trait=NULL, value=NULL, temp=NULL, sex=NULL, inference_notes=NULL, cascade=0){
  pars=list(
    "group_audience[und][]"=2,
    "group_content_access[und]"=2,
    "field_taxonomic_name[und]"=taxon_name,
    "field_bioacoustic_traits[und][0][field_call_type][und][0][value]"=call_type,
    "field_bioacoustic_traits[und][0][field_trait][und]"=trait,
    "field_bioacoustic_traits[und][0][field_value][und][0][value]"=value,
    "field_bioacoustic_traits[und][0][field_temperature][und][0][value]"=temp,
    "field_bioacoustic_traits[und][0][field_sex_trait][und][0][value]"=sex,
    "field_inference_notes[und][0][value]"=inference_notes
  )
  if (cascade==1) {
    pars <-c(pars, "field_bioacoustic_traits[und][0][field_cascade_down][und]"=1)
  }
  DrupalR::drupalr.postForm("bio.acousti.ca", "/node/add/bioacoustic-traits", "bioacoustic-traits-node-form", pars=pars, c)
}

BioAcoustica/bioacousticaR documentation built on May 5, 2019, 3:46 p.m.