residuals.BioSSA: Residuals of BioSSA decomposition

In BioSSA/BioSSA: A collection of methods for singular spectrum analysis of drosophila embryo (2d and 3d) gene expression

Description

Returns BioSSA residuals in the specified model.

Usage

## S3 method for class 'BioSSA2d'
residuals(object, groups, model = "additive", offset = 0, ...)
## S3 method for class 'BioSSA3d'
residuals(object, groups, model = "additive", offset = 0, ...)
## S3 method for class 'BioSSA2d.reconstruction'
residuals(object, model = "additive", offset = 0, ...)
## S3 method for class 'BioSSA3d.reconstruction'
residuals(object, model = "additive", offset = 0, ...)

Arguments

object	object of class ‘BioSSA2d’, ‘BioSSA3d’, ‘BioSSA2d.reconstruction’ or ‘BioSSA3d.reconstruction’
groups	numeric vector, indices of elementary components
model	model name ('additive', 'multiplicative' or 'poisson') or multiplicity power value
offset	numeric value, trend offset
...	additional arguments, passed to reconstruct

Value

Object of class ‘embryo2d’ or ‘embryo3d’ for 2d or 3d method correspondingly.

See Also

noise.model

BioSSA/BioSSA documentation built on May 5, 2019, 3:47 p.m.