snpCall: Get and retrieve SNP call and call probability data.

In Bioconductor/Biobase: Biobase: Base functions for Bioconductor

Get and retrieve SNP call and call probability data.

Description

These generic functions access the calls and call probabilities stored in objects.

Usage

snpCall(object, ...)
snpCall(object, ...) <- value
snpCallProbability(object, ...)
snpCallProbability(object, ...) <- value

Arguments

object	Object, possibly derived from class SnpSet.
value	Matrix with rows representing SNP calls or call probabilities and columns samples.
...	Additional arguments available to methods.

Value

snpCall returns a matrix of SNP calls; snpCallProbability returns the corresponding matrix of standard errors, when available.

Author(s)

Biocore

See Also

SnpSet-class

Bioconductor/Biobase documentation built on Nov. 2, 2024, 6:31 a.m.