## create an example HTML file with a footnote to be converted
input <- "This is a test sentence^[here is a footnote]"
tf_md <- tempfile(fileext = ".md")
writeLines(input, con = tf_md)
tf_html <- tempfile(fileext = ".html")
rmarkdown::pandoc_convert(input = tf_md, to = "html", output = tf_html, options = c("--wrap=preserve"))
## convert footnotes to sidenotes
lines <- BiocStyle:::process_footnotes(BiocStyle:::readUTF8(tf_html))
checkTrue(
any(grepl("sidenote", lines)), msg = "Sidenote not found in HTML output"
)
checkTrue(
!any(grepl("footnote-ref", lines)), msg = "Footnote found in HTML output"
)
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