Bioconductor/GenomeInfoDb: Utilities for manipulating chromosome names, including modifying them to follow a particular naming style

Contains data and functions that define and allow translation between different chromosome sequence naming conventions (e.g., "chr1" versus "1"), including a function that attempts to place sequence names in their natural, rather than lexicographic, order.

Getting started

Package details

Bioconductor views Annotation DataRepresentation Genetics GenomeAnnotation
Maintainer
LicenseArtistic-2.0
Version1.43.2
URL https://bioconductor.org/packages/GenomeInfoDb
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("Bioconductor/GenomeInfoDb")
Bioconductor/GenomeInfoDb documentation built on Dec. 2, 2024, 1:41 a.m.