callGRPCMethod: Issues a gRPC call to the Google Genomics service and returns...
In Bioconductor/GoogleGenomics: R Client for Google Genomics API

Description Usage Arguments Details Value See Also Examples

Needs gRPC support at package build time and the RProtoBuf package. See package README for instructions on installing gRPC.

1	callGRPCMethod(methodName, request)

`methodName`	The RPC method name.
`request`	The request object for the RPC, either as a JSON object generated from `rjson`, or as a `RProtoBuf` object modified from the default instance obtained from `getRProtoBufDefaultObject`.

In general, use higher level methods such as getReads and getVariants instead.

The raw response converted from JSON to an R object, or the RProtoBuf object if the request was an RProtoBuf object.

Other page fetch functions: getReadsPage, getSearchPage, getVariantsPage

# Authenticated on package load from the env variable GOOGLE_API_KEY.
if (isGRPCAvailable()) {
  request <- list(readGroupSetIds=list("CMvnhpKTFhDnk4_9zcKO3_YB"),
                  referenceName="22",
                  start=16051400, end=16051500, pageToken=NULL)
  reads <- callGRPCMethod("SearchReads", request)
  summary(reads)
} else {
  message("gRPC support is disabled; package was not compiled with GRPC")
}