aqListGOIDs: List GO Identifiers by GO Ontology

In Bioconductor/annotate: Annotation for microarrays

List GO Identifiers by GO Ontology

Description

This function returns a character vector of all GO identifiers in the specified ontologies: Biological Process (BP), Cellular Component (CC), Molecular Function (MF).

Usage

aqListGOIDs(ont)

Arguments

ont	A character vector specifying the two-letter codes of the ontologies from which all GO IDs will be retrieved. Entries must be one of "BP", "CC", or "MF".

Value

A character vector of GO IDs. The vector will contain all GO IDs in the GO ontologies specified by the ont argument.

Author(s)

Seth Falcon

Examples

## all GO IDs in BP
bp_ids = aqListGOIDs("BP")
length(bp_ids)

## all GO IDs in BP or CC
bp_or_cc_ids = aqListGOIDs(c("BP", "CC"))
length(bp_or_cc_ids)

Bioconductor/annotate documentation built on Nov. 2, 2024, 4:40 p.m.