Files in BrandonEdwards/bbsBayes
Hierarchical Bayesian Analysis of North American BBS Data
.Rbuildignore
.gitignore
.travis.yml
CODE_OF_CONDUCT.md
CONTRIBUTING.md
DESCRIPTION
ISSUES_TEMPLATE.md
LICENSE
NAMESPACE
PULL_REQUEST_TEMPLATE.md
R/bbsBayes-deprecated.R
R/bbsBayes-package.R
R/data.R
R/extract-index-data.R
R/fetch-bbs-data.R
R/generate-cont-indices.R
R/generate-cont-trend.R
R/generate-indices.R
R/generate-map.R
R/generate-regional-indices.R
R/generate-regional-trends.R
R/generate-strata-indices.R
R/generate-strata-trends.R
R/generate-trends.R
R/geofacet-plot.R
R/get-composite-regions.R
R/get-final-values.R
R/get-mcmc-list.R
R/get-prepared-data.R
R/get-species-aou.R
R/get-strata-area.R
R/load-bbs-data.R
R/load-map.R
R/load-sample-data.R
R/lppd.R
R/model-to-file.R
R/p-waic.R
R/plot-cont-indices.R
R/plot-indices.R
R/prepare-data.R
R/prepare-jags-data.R
R/r-hat.R
R/run-model.R
R/stratify.R
R/waic.R
README.md
bbsBayes.Rproj
data/bird_sample.rda
data/route_sample.rda
data/species_sample.rda
inst/CITATION
inst/area-weight/bcr.csv
inst/area-weight/db.csv
inst/area-weight/stateprov.csv
inst/area-weight/strat.csv
inst/area-weight/stratcan.csv
inst/composite-regions/bcr.csv
inst/composite-regions/db.csv
inst/composite-regions/stateprov.csv
inst/composite-regions/strat.csv
inst/composite-regions/stratcan.csv
inst/data-import/regs.csv
inst/data-import/state-dir.csv
inst/data-import/stop-dir.csv
inst/data-terms-2020
inst/data-terms-2022
inst/geofacet-grids/strat.csv
inst/geofacet-grids/stratcan.csv
inst/maps/BBS_BCR_strata.cpg
inst/maps/BBS_BCR_strata.dbf
inst/maps/BBS_BCR_strata.prj
inst/maps/BBS_BCR_strata.sbn
inst/maps/BBS_BCR_strata.sbx
inst/maps/BBS_BCR_strata.shp
inst/maps/BBS_BCR_strata.shp.xml
inst/maps/BBS_BCR_strata.shx
inst/maps/BBS_CWS_strata.cpg
inst/maps/BBS_CWS_strata.dbf
inst/maps/BBS_CWS_strata.prj
inst/maps/BBS_CWS_strata.sbn
inst/maps/BBS_CWS_strata.sbx
inst/maps/BBS_CWS_strata.shp
inst/maps/BBS_CWS_strata.shp.xml
inst/maps/BBS_CWS_strata.shx
inst/maps/BBS_LatLong_strata.cpg
inst/maps/BBS_LatLong_strata.dbf
inst/maps/BBS_LatLong_strata.prj
inst/maps/BBS_LatLong_strata.sbn
inst/maps/BBS_LatLong_strata.sbx
inst/maps/BBS_LatLong_strata.shp
inst/maps/BBS_LatLong_strata.shp.xml
inst/maps/BBS_LatLong_strata.shx
inst/maps/BBS_ProvState_strata.cpg
inst/maps/BBS_ProvState_strata.dbf
inst/maps/BBS_ProvState_strata.prj
inst/maps/BBS_ProvState_strata.sbn
inst/maps/BBS_ProvState_strata.sbx
inst/maps/BBS_ProvState_strata.shp
inst/maps/BBS_ProvState_strata.shp.xml
inst/maps/BBS_ProvState_strata.shx
inst/maps/BBS_USGS_strata.cpg
inst/maps/BBS_USGS_strata.dbf
inst/maps/BBS_USGS_strata.prj
inst/maps/BBS_USGS_strata.sbn
inst/maps/BBS_USGS_strata.sbx
inst/maps/BBS_USGS_strata.shp
inst/maps/BBS_USGS_strata.shp.xml
inst/maps/BBS_USGS_strata.shx
inst/models/first-difference.jags
inst/models/first-difference.t.jags
inst/models/gam-ye.jags
inst/models/gam-ye.t.jags
inst/models/gam.jags
inst/models/gam.t.jags
inst/models/slope.jags
inst/models/slope.t.jags
inst/species-lump-split/lump.csv
man/bbsBayes-deprecated.Rd
man/bird_sample.Rd
man/extract_index_data.Rd
man/fetch_bbs_data.Rd
man/figures/AMKE_all.png
man/figures/AMKE_firstdiff.png
man/figures/AMKE_gam.png
man/figures/AMKE_gamye.png
man/figures/AMKE_slope.png
man/figures/Alternate_n_all.png
man/figures/BARS_Canada_Trajectory.png
man/figures/BARS_Continental_Trajectory.png
man/figures/BARS_alternate_n2.png
man/figures/BARS_default_n.png
man/figures/BARS_geofacet.png
man/figures/BARS_trendmap.png
man/figures/CCLO_alternate_n2.png
man/figures/CCLO_default_n.png
man/figures/PAWR_Canada.png
man/figures/WOTH_status_assessment.png
man/figures/logo.png
man/generate_indices.Rd
man/generate_map.Rd
man/generate_trends.Rd
man/geofacet_plot.Rd
man/get_composite_regions.Rd
man/get_final_values.Rd
man/get_mcmc_list.Rd
man/get_prepared_data.Rd
man/get_species_aou.Rd
man/get_strata_area.Rd
man/load_bbs_data.Rd
man/load_map.Rd
man/load_sample_data.Rd
man/lppd.Rd
man/model_to_file.Rd
man/plot_indices.Rd
man/prepare_data.Rd
man/r_hat.Rd
man/route_sample.Rd
man/run_model.Rd
man/species_sample.Rd
man/stratify.Rd
