tssObject: *tssObject*

Description Usage Arguments Value Examples

View source: R/Allclasses.R

Description

S4 constructor function for tssObject

Usage

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tssObject(
  title = NA,
  bamDataFirstRead = NA,
  bamDataLastRead = NA,
  bedData = NA
)

Arguments

title

'character' A short descriptive title for the experiment. Is set to NA by default.

bamDataFirstRead

'list' the name of a list of GAlignments objects (originating from .bam files) in the workspace. Set to NA by default.

bamDataLastRead

'list' the name of a list of GAlignments objects (originating from paired-read .bam files) in the workspace. Set to NA by default.

bedData

'list' the name of a list of GRanges or Pairs objects (originating from .bed files) in the workspace. Set to NA by default.

Value

a new tssObject is returned to the user's workspace.

Examples

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new.tssObj <- tssObject(title="Example")

BrendelGroup/TSRchitect documentation built on March 3, 2021, 1:45 a.m.