checkPed: Checks for errors and conformities in a pedigree file

In BrnCPrz/PedyR: Handles genealogical structured data

Description

This function checks for common errors in genealogical structured data

Usage

checkPed(pedigree, id = 1, sire = 2, dam = 3, rmsingle = FALSE,
  verbose = FALSE)

Arguments

pedigree	a data.frame with three columns: id, sire and dam
id	integer containning the column where animal ids are located in the pedigree
sire	integer containning the column where sire ids are located in the pedigree
dam	integer containning the column where dam ids are located in the pedigree

Examples

id = c(1,2,3,4,5,6,7,8,9,10)
sire = c(0,0,1,1,3,5,5,5,7,7)
dam = c(0,0,2,2,2,4,4,6,6,8)
ped = as.data.frame(cbind(id,sire,dam))
checkPed(ped)

BrnCPrz/PedyR documentation built on May 6, 2019, 8:47 a.m.