makeMLPAparams: Create parameter list for size structured model

Description Usage Arguments Value

Description

Create parameter list for size structured model

Usage

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makeMLPAparams(m, Linf, k, x0, c, d, xM, xmax, kernel, CR = 4, scale = 100,
  habitat = 1)

Arguments

m

Instantaneous natural mortality rate

Linf

Asymptotic size for von Bertelanffy growth model

k

Initial growth rate for von Bertelanffy growth model

x0

Initial size for von Bertelanffy growth model (may be negative)

c

Coefficent for transforming size into biomass

d

Exponent for tranforming size (length) into biomass

xM

Age at first reproduction

xmax

Maximum age

kernel

Collection of square dispersal kernels, arrange in a three-dimensional array with source locations in columns, destination locations in rows, and years along the third dimension of the array

CR

The compensation ratio (sets intensity of density dependence; for some reason, it is four for all species!)

scale

Equilibrium spawning stock biomass in a deterministic, nonspatial model with unit area

habitat

The amount of habitat in each location. May be a scalar (all locations the same) or a vector with length matching the first dimension of kernel

Value

A list containing all the parameters needed to run MLPAiter


BruceKendall/FlowFishFishing documentation built on May 6, 2019, 8:47 a.m.