Global functions | |
---|---|
.onAttach | Source code |
.onLoad | Source code |
.onUnload | Source code |
.split_dependencies | Source code |
EventDistribution | Source code |
ExtractClimateChangeScenarios | Man page Source code |
ExtractClimateWizard | Man page Source code |
ExtractData_Elevation | Man page Source code |
ExtractData_MeanMonthlyClimate | Man page Source code |
ExtractData_Soils | Man page Source code |
ExtractDayMet | Man page |
ExtractGriddedDailyWeatherFromDayMet_NorthAmerica_dbW | Man page Source code |
ExtractGriddedDailyWeatherFromDayMet_NorthAmerica_swWeather | Man page Source code |
ExtractGriddedDailyWeatherFromMaurer2002_NorthAmerica | Man page Source code |
ExtractGriddedDailyWeatherFromNRCan_10km_Canada | Man page Source code |
ExtractLookupWeatherFolder | Source code |
GriddedDailyWeatherFromNCEPCFSR_Global | Man page Source code |
ISRICWISE_extract_SUIDs | Man page Source code |
ISRICWISE_get_prids | Source code |
PRAGMA_settings1 | Man page Source code |
PRAGMA_settings2 | Man page Source code |
PrepareClimateScenarios | Man page Source code |
SFSW2_read_csv | Man page Source code |
SFSW2_read_inputfile | Man page Source code |
addHeaderToWhereClause | Source code |
add_dbOutput_index | Source code |
add_dbWork_index | Source code |
add_delta_to_PPT | Man page Source code |
add_granular_dbWork | Man page Source code |
add_status_dbWork | Man page Source code |
add_weights | Source code |
adjust.WindspeedHeight | Man page Source code |
adjustLayersDepth | Man page Source code |
adjust_soils_todos | Source code |
align_with_target_grid | Man page Source code |
align_with_target_res | Man page Source code |
applyDelta_oneYear | Source code |
applyDeltas | Man page Source code |
applyDeltas2 | Source code |
applyPPTdelta_detailed | Man page Source code |
applyPPTdelta_simple | Man page Source code |
assign_aggregation_soillayers | Man page Source code |
benchmark_BLAS | Source code |
calc.ensembles | Source code |
calcDeltas | Man page Source code |
calc_BareSoilEvapCoefs | Man page Source code |
calc_DailyScenarioWeather | Man page Source code |
calc_Days_withLoweredPPT | Man page Source code |
calc_MonthlyScenarioWeather | Man page Source code |
calc_RequestedSoilLayers | Man page Source code |
calc_assocYears | Source code |
calc_cell_ISRICWISE | Man page Source code |
calc_drylandindices | Man page Source code |
calc_getYears | Source code |
calc_ids_ToDo | Source code |
calc_ncfile_times | Source code |
calc_timeSlices | Man page Source code |
check_aggregated_output | Man page Source code |
check_cltool | Man page Source code |
check_data_agreement | Source code |
check_dbWeather_version | Man page Source code |
check_intracker_design | Man page Source code |
check_lock_content | Man page Source code |
check_nc_time_axis | Source code |
check_outputDB_completeness | Man page Source code |
check_rSFSW2_project_input_data | Man page Source code |
check_rSW2_version | Man page Source code |
check_requested_sites | Source code |
check_soil_data | Source code |
check_soilco | Man page Source code |
check_weatherDB | Man page Source code |
clean_SFSW2_cluster | Man page Source code |
clean_worker | Man page Source code |
climscen_determine_sources | Man page Source code |
climscen_metadata | Man page Source code |
coerce_sqlNames | Source code |
collect_EnsembleFromScenarios | Source code |
colnames_modification_status_dbWork | Source code |
colnames_need_outputs_dbWork | Source code |
colnames_work_dbWork | Source code |
compare_test_output | Man page Source code |
compare_two_dbOutput | Man page Source code |
compile_overall_timer | Man page Source code |
complete_with_defaultpaths | Source code |
controlExtremePPTevents | Man page Source code |
convert_to_todo_list | Source code |
copy_tempdata_to_dbW | Source code |
create_dbWork | Man page Source code |
create_filename_for_Maurer2002_NorthAmerica | Source code |
create_job_df | Source code |
crs_units | Man page Source code |
daily_spells_permonth | Source code |
dbConnect2 | Man page Source code |
dbExecute2 | Man page Source code |
dbOut_check_values | Man page Source code |
dbOut_prepare1 | Source code |
dbOut_read_variables_from_scenario | Man page Source code |
dbOut_update_values | Man page Source code |
dbOutput_ListDesignTables | Man page Source code |
dbOutput_ListInternalTables | Man page Source code |
dbOutput_ListOutputTables | Man page Source code |
dbOutput_Tables_have_SoilLayers | Man page Source code |
dbOutput_add_calculated_field | Man page Source code |
dbOutput_create_DailyAggregationTable | Source code |
dbOutput_create_Design | Source code |
dbOutput_create_EnsembleTables | Source code |
dbOutput_create_OverallAggregationTable | Source code |
dbOutput_subset | Man page Source code |
dbOutput_update_OverallAggregationTable | Man page Source code |
dbVacuumRollack | Man page Source code |
dbW_disconnectConnection_local | Source code |
dbW_setConnection_local | Source code |
dbWork_Ntodo | Man page Source code |
dbWork_agg_timing | Man page Source code |
dbWork_check_design | Man page Source code |
dbWork_check_granular | Man page Source code |
dbWork_check_run | Man page Source code |
dbWork_check_status | Man page Source code |
dbWork_checkpoint | Man page Source code |
dbWork_clean | Man page Source code |
dbWork_redo | Man page Source code |
dbWork_report_completion | Man page Source code |
dbWork_timing | Man page Source code |
dbWork_todos | Man page Source code |
dbWork_update_IncludeYN | Man page Source code |
dbWork_update_granular | Man page Source code |
dbWork_update_job | Man page Source code |
dbWork_update_status | Man page Source code |
delete_test_output | Man page Source code |
determine_simulation_size | Man page Source code |
dir.copy | Source code |
dir.create2 | Source code |
dir_safe_create | Man page Source code |
doQmapQUANT | Man page |
doQmapQUANT.default_drs | Man page Source code |
doQmapQUANT_drs | Man page Source code |
do_ExtractElevation_HWSD_Global | Source code |
do_ExtractElevation_NED_USA | Source code |
do_OneSite | Man page Source code |
do_compare_nc | Man page Source code |
do_copyCurrentConditionsFromDatabase | Source code |
do_import_objects | Source code |
do_ncvar_netCDF | Source code |
do_prior_TableLookups | Man page Source code |
downscale | Man page |
downscale.delta | Man page Source code |
downscale.deltahybrid | Man page Source code |
downscale.deltahybrid3mod | Man page Source code |
downscale.periods | Man page Source code |
downscale.raw | Man page Source code |
downscale.wgen_package | Source code |
dw_DayMet_NorthAmerica | Source code |
dw_Livneh2013_NorthAmerica | Source code |
dw_LookupWeatherFolder | Source code |
dw_Maurer2002_NorthAmerica | Source code |
dw_NCEPCFSR_Global | Source code |
dw_NRCan_10km_Canada | Source code |
dw_determine_sources | Man page Source code |
dw_gridMET_NorthAmerica | Source code |
enable_debug_dump | Man page Source code |
endDoyAfterDuration | Source code |
exit_SFSW2_cluster | Man page Source code |
export_objects_to_workers | Man page Source code |
export_parallel_glovars | Source code |
extract2_Raster_SpatialPolygons | Source code |
extract_SFSW2_cells_from_raster | Man page Source code |
extract_SFSW2_cells_from_shp | Man page Source code |
extract_SFSW2_default | Source code |
extract_SFSW2_points_from_shp | Man page Source code |
extract_blocks | Man page Source code |
extract_climate_NCEPCFSR | Man page Source code |
extract_climate_NOAAClimAtlas | Source code |
extract_daily_variable_netCDF | Source code |
extract_daily_weather_from_gridMET | Man page Source code |
extract_daily_weather_from_livneh | Man page Source code |
extract_from_external_raster_old | Man page Source code |
extract_monthly_variable_netCDF | Source code |
extract_rSFSW2 | Man page |
extract_rSFSW2,Raster,Raster,character-method | Man page |
extract_rSFSW2,Raster,SpatialPoints,character-method | Man page |
extract_rSFSW2,Raster,data.frame,character-method | Man page |
extract_rSFSW2,Raster,matrix,character-method | Man page |
extract_rSFSW2,Raster,vector,character-method | Man page |
extract_rSFSW2,SpatialPolygons,SpatialPoints,character-method | Man page |
extract_rSFSW2,SpatialPolygons,SpatialPolygons,character-method | Man page |
extract_rSFSW2,SpatialPolygons,matrix,character-method | Man page |
extract_rSFSW2,SpatialPolygons,vector,character-method | Man page |
extract_rSFSW2,character,ANY,character-method | Man page |
extract_soil_CONUSSOIL | Man page Source code |
extract_soil_ISRICWISE | Man page Source code |
extract_soillayer_ISRICWISE | Source code |
extract_variable_NEX | Source code |
extreme_values_and_doys | Source code |
fields_dailyAETExtremes | Source code |
fields_dailyC4_TempVar | Source code |
fields_dailyColdDays | Source code |
fields_dailyColdDegreeDays | Source code |
fields_dailyCoolDays | Source code |
fields_dailyDegreeDays | Source code |
fields_dailyDrainageExtremes | Source code |
fields_dailyFrostInSnowfreePeriod | Source code |
fields_dailyHotDays | Source code |
fields_dailyInfiltrationExtremes | Source code |
fields_dailyNRCS_Chambers2014_ResilienceResistance | Source code |
fields_dailyNRCS_Maestas2016_ResilienceResistance | Source code |
fields_dailyNRCS_SoilMoistureTemperatureRegimes | Source code |
fields_dailyNRCS_SoilMoistureTemperatureRegimes_Intermediates | Source code |
fields_dailyPrecipitationEventSizeDistribution | Source code |
fields_dailyPrecipitationFreeEventDistribution | Source code |
fields_dailyRechargeExtremes | Source code |
fields_dailyRegeneration_GISSM | Source code |
fields_dailyRegeneration_bySWPSnow | Source code |
fields_dailySWPdrynessANDwetness | Source code |
fields_dailySWPdrynessDurationDistribution | Source code |
fields_dailySWPdrynessEventSizeDistribution | Source code |
fields_dailySWPdrynessIntensity | Source code |
fields_dailySWPextremes | Source code |
fields_dailySnowpack | Source code |
fields_dailySoilWaterPulseVsStorage | Source code |
fields_dailySuitablePeriodsAvailableWater | Source code |
fields_dailySuitablePeriodsDrySpells | Source code |
fields_dailySuitablePeriodsDuration | Source code |
fields_dailyThermalDrynessStartEnd | Source code |
fields_dailyThermalDrynessStress | Source code |
fields_dailyThermalSWPConditionCount | Source code |
fields_dailyTotalEvaporationExtremes | Source code |
fields_dailyTranspirationExtremes | Source code |
fields_dailyWarmDays | Source code |
fields_dailyWeatherGeneratorCharacteristics | Source code |
fields_dailyWetDegreeDays | Source code |
fields_input_CO2Effects | Source code |
fields_input_ClimatePerturbations | Source code |
fields_input_FractionVegetationComposition | Source code |
fields_input_Phenology | Source code |
fields_input_SoilProfile | Source code |
fields_input_TranspirationCoeff | Source code |
fields_input_VegetationBiomassMonthly | Source code |
fields_input_VegetationBiomassTrends | Source code |
fields_input_VegetationPeak | Source code |
fields_monthlyAET | Source code |
fields_monthlyAETratios | Source code |
fields_monthlyDeepDrainage | Source code |
fields_monthlyHydraulicRedistribution | Source code |
fields_monthlyInfiltration | Source code |
fields_monthlyPET | Source code |
fields_monthlyPETratios | Source code |
fields_monthlyPPT | Source code |
fields_monthlyPlantGrowthControls | Source code |
fields_monthlyRunoff | Source code |
fields_monthlyRunon | Source code |
fields_monthlySPEIEvents | Source code |
fields_monthlySWAbulk | Source code |
fields_monthlySWCbulk | Source code |
fields_monthlySWPdryness | Source code |
fields_monthlySWPmatric | Source code |
fields_monthlySeasonalityIndices | Source code |
fields_monthlySnowpack | Source code |
fields_monthlySoilEvaporation | Source code |
fields_monthlySoilTemp | Source code |
fields_monthlyTemp | Source code |
fields_monthlyTranspiration | Source code |
fields_monthlyVPD | Source code |
fields_monthlyVWCbulk | Source code |
fields_monthlyVWCmatric | Source code |
fields_periodicVWCmatricFirstLayer | Source code |
fields_yearlyAET | Source code |
fields_yearlyDryWetPeriods | Source code |
fields_yearlyPET | Source code |
fields_yearlyPPT | Source code |
fields_yearlyTemp | Source code |
fields_yearlyTranspirationBySoilLayer | Source code |
fields_yearlyWaterBalanceFluxes | Source code |
fields_yearlymonthlyTemperateDrylandIndices | Source code |
file.copy2 | Source code |
fill_bounding_box | Source code |
fill_empty | Source code |
find_gridMET_files | Man page Source code |
find_sites_with_bad_weather | Man page Source code |
fix_PPTdata_length | Man page Source code |
fix_rowlabels | Source code |
fname_dbWork | Source code |
gather_args_do_OneSite | Source code |
gather_objects_for_export | Man page Source code |
gather_project_inputs | Source code |
generate_OverallAggregation_fields | Man page Source code |
generate_RNG_streams | Man page Source code |
generate_ensembles | Source code |
get.LookupFromTable | Source code |
get.SeveralOverallVariables | Man page Source code |
get.SeveralOverallVariables_Ensemble | Man page Source code |
get.SeveralOverallVariables_Scenario | Man page Source code |
get.SeveralOverallVariables_Scenario_old | Man page Source code |
get.Table | Man page Source code |
get.Table_Ensemble | Man page Source code |
get.Table_Scenario | Man page Source code |
getIDs_from_db_Pids | Source code |
getSiteIds | Source code |
get_AET_dy | Man page Source code |
get_AET_mo | Man page Source code |
get_AET_yr | Man page Source code |
get_BareSoilEvapCoefs | Man page Source code |
get_CO2effects_yr | Man page Source code |
get_DF_from_temptxt | Source code |
get_DailyGCMdata_netCDF | Man page Source code |
get_DailyScenarioData_netCDF | Source code |
get_DayMet_NorthAmerica | Source code |
get_DayMet_cellID | Source code |
get_DeepDrain_dy | Man page Source code |
get_DeepDrain_mo | Man page Source code |
get_DeepDrain_yr | Man page Source code |
get_Esurface_dy | Man page Source code |
get_Esurface_yr | Man page Source code |
get_GCMdata_NEX | Man page Source code |
get_Inf_dy | Man page Source code |
get_Inf_mo | Man page Source code |
get_Inf_yr | Man page Source code |
get_Interception_yr | Man page Source code |
get_MonthlyGCMdata_netCDF | Man page Source code |
get_NCEPCFSR_data | Source code |
get_PET_mo | Man page Source code |
get_PET_yr | Man page Source code |
get_PPT_dy | Man page Source code |
get_PPT_mo | Man page Source code |
get_PPT_yr | Source code |
get_Pid_from_temptxt | Man page Source code |
get_Response_aggL | Man page Source code |
get_RunOnOff_mo | Man page Source code |
get_RunOnOff_yr | Man page Source code |
get_SWE_dy | Man page Source code |
get_SWE_mo | Man page Source code |
get_SWPmatric_aggL | Source code |
get_SoilLayerID_from_temptxt | Man page Source code |
get_SpatialIndices_netCDF | Source code |
get_Temp_dy | Man page Source code |
get_Temp_mo | Man page Source code |
get_Temp_yr | Man page Source code |
get_TimeIndices_netCDF | Source code |
get_VPD_dy | Source code |
get_VPD_mo | Man page Source code |
get_Vegetation_yr | Man page Source code |
get_climatechange_data | Source code |
get_datasource_includefield | Source code |
get_datasource_masterfield | Source code |
get_fieldnames | Man page Source code |
get_fnames_dbTempOut | Man page Source code |
get_fnames_temporaryOutput | Man page Source code |
get_inserted_ids | Source code |
get_minVersion_rSOILWAT2 | Source code |
get_nc_time_axis | Man page Source code |
get_ncrecordvariable_name | Source code |
get_nctime_attributes | Source code |
get_ncvalues_at_times | Source code |
get_ncvar_attributes | Source code |
get_request_NEX | Source code |
get_simulation_time | Man page Source code |
get_tablename_from_temptxt | Man page Source code |
get_time_unit | Source code |
global_args_do_OneSite | Man page Source code |
gribDailyWeatherData | Source code |
gribMonthlyClimate | Source code |
gridMET_download_and_check | Man page Source code |
gridMET_metadata | Man page Source code |
has_NAs_pooled_at_depth | Man page Source code |
has_Pid | Source code |
has_Pid_SoilLayerID | Source code |
has_incompletedata | Source code |
has_nodata | Source code |
in_box | Source code |
indices | Man page |
init_SFSW2_cluster | Man page Source code |
init_intracker | Man page Source code |
init_rSFSW2_project | Man page Source code |
init_soiltemperature | Source code |
init_timer | Man page Source code |
is_ClimateForecastConvention | Source code |
is_NEX | Source code |
is_project_script_file_recent | Man page Source code |
isdone_intracker | Man page Source code |
it_Pid | Man page Source code |
it_Pid0 | Man page Source code |
it_exp | Man page Source code |
it_exp2 | Man page Source code |
it_scen2 | Man page Source code |
it_sim0 | Man page Source code |
it_sim2 | Man page Source code |
it_site | Man page Source code |
it_site2 | Man page Source code |
list.dbTables | Man page Source code |
list.dbVariables | Man page Source code |
list.dbVariablesOfAllTables | Man page Source code |
list.dirs2 | Source code |
load_Rsw_treatment_templates | Source code |
load_preprocessed_inputs | Man page Source code |
load_project_description | Man page Source code |
local_weatherDirName | Man page Source code |
lock | Man page |
lock_access | Man page Source code |
lock_attempt | Man page Source code |
lock_init | Man page Source code |
make_dbOutput | Man page Source code |
make_dbTempOut | Source code |
make_dbW | Man page Source code |
make_test_output_reference | Man page Source code |
maker.climateScenarios | Source code |
map_input_variables | Source code |
max_depth_byPRIDs | Source code |
merge_2soils | Man page Source code |
missing_Pids_outputDB | Man page Source code |
move_dbTempOut_to_dbOut | Man page Source code |
move_output_to_dbOutput | Man page Source code |
move_temporary_to_outputDB | Man page Source code |
move_temporary_to_outputDB_withChecks | Man page Source code |
mpi_last | Man page Source code |
mpi_work | Man page Source code |
obtain_CMIP5_MACAv2metdata_USA | Man page Source code |
paste_SQLite_CREATETABLE | Source code |
populate_rSFSW2_project_with_data | Man page Source code |
pragmas | Man page |
prepare_ExtractData_Elevation | Source code |
prepare_ExtractData_Soils | Man page Source code |
prepare_MeanMonthlyClimate | Source code |
prepare_NCEPCFSR_extraction | Source code |
prepare_climatedata_netCDFs | Man page Source code |
prepare_site_with_daily_scenario_weather | Source code |
print_debug | Source code |
print_debugN | Source code |
process_inputs | Man page Source code |
quickprepare_dbOutput_dbWork | Man page Source code |
rSFSW2 | Man page |
rSFSW2-package | Man page |
rbind_2cols_nonoverlapping | Man page Source code |
read_SOILWAT2_DefaultInputs | Man page Source code |
read_time_netCDF | Man page Source code |
reaggregate_raster | Man page Source code |
reaggregate_shapefile | Man page Source code |
reconstitute_inputfile | Man page Source code |
recreate_dbWork | Man page Source code |
regenerationThisYear_YN | Source code |
remove_from_onexit_expression | Man page Source code |
remove_lock | Man page Source code |
req_fields_SWRunInformation | Source code |
res_to_polygons | Man page Source code |
run_simulation_experiment | Man page Source code |
run_test_projects | Man page Source code |
save_to_rds_with_backup | Man page Source code |
select_suitable_CFs | Man page Source code |
setBottomLayer | Source code |
setDeepestTopLayer | Source code |
setLayerSequence | Source code |
setTopLayer | Source code |
set_PRAGMAs | Man page Source code |
set_RNG_stream | Man page Source code |
set_full_RNG | Man page Source code |
set_glovar | Man page Source code |
set_options_warn_error | Man page Source code |
set_paths_to_dailyweather_datasources | Source code |
setup_RNG | Man page Source code |
setup_SFSW2_cluster | Man page Source code |
setup_aggregation_options | Source code |
setup_dbWork | Man page Source code |
setup_meandaily_output | Source code |
setup_rSFSW2_project_infrastructure | Man page Source code |
setup_scenarios | Source code |
setup_spatial_simulation | Man page Source code |
setup_time_simulation_project | Man page Source code |
simulate_SOILWAT2_experiment | Man page Source code |
split_SQLite_CREATETABLE | Source code |
startDoyOfDuration | Source code |
swOutput_access | Man page |
synchronicity | Man page |
tabulate_values_in_bins | Source code |
time_agrees_with_ncfilename | Source code |
todo_intracker | Man page Source code |
transferExpDesignToInput | Source code |
trewartha_climate | Man page Source code |
tryToGet_ClimDB | Man page Source code |
try_MonthlyScenarioWeather | Man page Source code |
try_cell_ISRICWISE | Man page Source code |
try_prepare_site_with_daily_scenario_weather | Source code |
unique_times | Source code |
unlock | Man page |
unlock_access | Man page Source code |
update_MeanMonthlyClimate | Source code |
update_actions | Man page Source code |
update_datasource_masterfield | Source code |
update_elevation_input | Source code |
update_intracker | Man page Source code |
update_project_paths | Source code |
update_runIDs_sites_by_dbW | Man page Source code |
update_scenarios_with_ensembles | Source code |
update_soils_input | Source code |
update_todos | Man page Source code |
upgrade_datafile | Man page Source code |
upgrade_prodin_v10_to_v11 | Man page Source code |
upgrade_soilsin_v11_to_v12 | Man page Source code |
useSlices | Source code |
vp0 | Man page Source code |
vpd | Man page Source code |
weighted.agg | Man page Source code |
whereNearest | Man page Source code |
writeDailyWeatherData | Source code |
writeMonthlyClimate | Source code |
write_timer | Source code |
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