prep_HTO_q_area_plot: Make an area plot of proportions of cells assigned to...
Description Usage Arguments Value
Description
Make an area plot of proportions of cells assigned to singlets, doublets, and negatives as a function of the positive.quantile provided to Seurat::HTODemux
Usage
1 2 3 4 5 | prep_HTO_q_area_plot(
seurat_obj,
vec_range_quantile = seq(0.8, 0.99, 0.01),
n_cores_max = Inf
)
|
Arguments
seurat_obj |
A seurat object |
vec_range_quantile |
a numeric vector of quantile values (0-1) |
n_cores_max |
max number of cores to use in multicore processing |
Value
a ggplot2 object
