prep_intrahash_doub: Estimate intra-hashtag doublets by finding cells whose...
In CBMR-Single-Cell-Omics-Platform/SCOPfunctions: Single Cell Omics Platform Functions
Description
Usage
Arguments
Value
Description
Estimate intra-hashtag doublets by finding cells whose nearest neighbours are doublets
Usage
1
prep_intrahash_doub(seurat_obj, assay = "RNA", npcs = 20, randomSeed = 12345)
Arguments
seurat_obj
a Seurat object
assay
Seurat object assay to use
npcs
number of principal components to use
randomSeed
random seed for random number generator
Value
Seurat object with a predicted_dub_intra logical column added to metadata
CBMR-Single-Cell-Omics-Platform/SCOPfunctions documentation built on May 29, 2021, 3:52 p.m.
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Description Usage Arguments Value
Description
Estimate intra-hashtag doublets by finding cells whose nearest neighbours are doublets
Usage
1 | prep_intrahash_doub(seurat_obj, assay = "RNA", npcs = 20, randomSeed = 12345)
|
Arguments
seurat_obj |
a Seurat object |
assay |
Seurat object assay to use |
npcs |
number of principal components to use |
randomSeed |
random seed for random number generator |
Value
Seurat object with a predicted_dub_intra logical column added to metadata
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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