compute_LH_cpp: compute_LH_cpp

In CDecamps/penda: A R package that performs personalized differential analysis of comics data

compute_LH_cpp

Description

This function makes the matrices L and H for all the genes with a new method.

Usage

compute_LH_cpp(data_ctrl, threshold, size_max)

Arguments

data_ctrl	A numeric matrix with the genes expressions for each patient. Must be sort by the median.
threshold	The proportion of genes that must be under or above the gene.
size_max	The maximum number of L and H genes for each gene..

Value

This function returns a list of two logical matrices : the L matrix, with the id of closest genes with a lower expression, the H Matrix with the id of closest genes with a higher expression, And the n string vector with the genes names.

CDecamps/penda documentation built on March 29, 2024, 3:26 a.m.