normalizeRS: Normalize Repli-seq assay
In CL-CHEN-Lab/RepliSeq: Repliseq
Description
Usage
Arguments
Value
Description
Calculate Repli-seq assay count matrices after normalizing (dividing counts by ratios)
Usage
1
normalizeRS(rs_assay, norm_ratios, round_digits = 3)
Arguments
rs_assay
a Repli-seq assay (data.frame) loaded with readRS() and formatted as chr,start,stop,S1,...,Sx
norm_ratios
an array with the ratios in the order of rs_assay fractions
round_digits
amount of digits after comma to conserve in the output when rounding (default = 3)
Value
a Repli-seq assay after normalizing (dividing fractions by ratios) as a data.frame and formatted as chr,start,stop,S1,...,Sx
CL-CHEN-Lab/RepliSeq documentation built on Sept. 11, 2021, 12:04 p.m.
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Description Usage Arguments Value
Description
Calculate Repli-seq assay count matrices after normalizing (dividing counts by ratios)
Usage
1 | normalizeRS(rs_assay, norm_ratios, round_digits = 3)
|
Arguments
rs_assay |
a Repli-seq assay (data.frame) loaded with readRS() and formatted as chr,start,stop,S1,...,Sx |
norm_ratios |
an array with the ratios in the order of rs_assay fractions |
round_digits |
amount of digits after comma to conserve in the output when rounding (default = 3) |
Value
a Repli-seq assay after normalizing (dividing fractions by ratios) as a data.frame and formatted as chr,start,stop,S1,...,Sx
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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