writes one BigWig file per fraction in the provided Repli-seq assay
1 2 3 4 5 6 7 8 9 10 | writeBigwig(
rs_assay,
path_file,
sample_name,
chromsizes,
wiggle_start,
wiggle_step,
wiggle_span,
system_separator = "/"
)
|
rs_assay |
a Repli-seq assay (data.frame) loaded with readRS() and formatted as chr,start,stop,S1,...,Sx (or S0) |
path_file |
a path to the files to write |
sample_name |
a string for the file names |
chromsizes |
path to the chromsizes file to pass to WigToBigWig as argument |
wiggle_start |
a numeric value for wiggle header |
wiggle_step |
a numeric value for wiggle header |
wiggle_span |
a numeric value for wiggle header |
system_separator |
default is "/" as dedicated for linux file system |
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