Files in CLippmann/ORA
Overrepresentation Analysis

.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
ORA.Rproj
R/EvidenceCode2Key.R R/GOroot2TermPaths.R R/MaxPathL2Leaf.R R/MaxPathL2Root.R R/MinPathL2Leaf.R R/MinPathL2Root.R R/NCBI2GeneName.R R/ORA.R R/ORAfilename.R R/OntoName2No.R R/ReadLRN.R R/ReadNAMES.R R/ReadSparseMatrix.R R/ReadTXT.R R/WriteLRN.R R/WriteNAMES.R R/WriteORAresults.R R/WriteSparseMatrix.R R/addext.R R/adjMatrixTermsAncestors.R R/ask2loadFile.R R/certainty.R R/checkFilename.R R/checkORAparameters.R R/dbtORA.R R/drawORA.R R/hypergeoTest.R R/importance.R R/infoValue.R R/ontologyNr.R R/plotGOgraph.R R/remarkableness.R R/sortby.R R/termDescription.R R/termId.R R/termNr.R R/termpathsHeadlines.R R/termsAncestors.R R/updateORAdatabase.R README.md inst/doc/Vignette_V2.R inst/doc/Vignette_V2.Rmd
inst/doc/Vignette_V2.html
inst/extdata/AdjBPsparseMatrix.lrn
inst/extdata/AdjBPsparseMatrix.names
inst/extdata/AdjCCsparseMatrix.lrn
inst/extdata/AdjCCsparseMatrix.names
inst/extdata/AdjMFsparseMatrix.lrn
inst/extdata/AdjMFsparseMatrix.names
inst/extdata/AllAnnNCBIsPlusGeneName.names
inst/extdata/BPAncestorsSparseMatrix.lrn
inst/extdata/BPAncestorsSparseMatrix.names
inst/extdata/CCAncestorsSparseMatrix.lrn
inst/extdata/CCAncestorsSparseMatrix.names
inst/extdata/EvidenceCodes.names
inst/extdata/ExampleNCBInamesFile.names
inst/extdata/GOAall.lrn
inst/extdata/GOTermInfosBP.lrn
inst/extdata/GOTermInfosCC.lrn
inst/extdata/GOTermInfosMF.lrn
inst/extdata/MFAncestorsSparseMatrix.lrn
inst/extdata/MFAncestorsSparseMatrix.names
man/GOroot2TermPaths.Rd man/NCBI2GeneName.Rd man/ORA-package.Rd man/ORA.Rd man/ORAfilename.Rd man/WriteORAresults.Rd man/adjMatrixTermsAncestors.Rd man/certainty.Rd man/checkORAparameters.Rd man/dbtORA.Rd man/drawORA.Rd man/hypergeoTest.Rd man/importance.Rd man/infoValue.Rd man/ontologyNr.Rd man/plotGOgraph.Rd man/remarkableness.Rd man/termDescription.Rd man/termId.Rd man/termNr.Rd man/termpathsHeadlines.Rd man/termsAncestors.Rd man/updateORAdatabase.Rd vignettes/Vignette_V2.Rmd
CLippmann/ORA documentation built on April 6, 2018, 1:49 a.m.