otureps: A dataframe called "outreps" with sequence identifiers and...
In CMET-UGent/CMETNGS: Convenience functions for CMET NGS automated pipeline
Description
A dataset containing representative sequences from a MiSeq V4 run at the end
of the default mothur pipeline at CMET (alignment to the mothur recreated
SILVA seed release 123, and filtered). Typically, the sequences are chosen
based upon the most abundant sequence within an individual OTU.
Usage
1
Format
A data frame with 21640 rows and 2 variables:
- OTU
sequence identifier Otu00001-Otu21640
- readseq
filtered aligned DNA sequence
CMET-UGent/CMETNGS documentation built on Dec. 12, 2020, 8:22 a.m.
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Description
A dataset containing representative sequences from a MiSeq V4 run at the end of the default mothur pipeline at CMET (alignment to the mothur recreated SILVA seed release 123, and filtered). Typically, the sequences are chosen based upon the most abundant sequence within an individual OTU.
Usage
1 |
Format
A data frame with 21640 rows and 2 variables:
- OTU
sequence identifier Otu00001-Otu21640
- readseq
filtered aligned DNA sequence
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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