readCentrData: Read imzML data
In CeMOS-Mannheim/moleculaR: Spatial Probabilistic Mapping of Metabolite Ensembles in Mass Spectrometry Imaging
View source: R/readCentrData.R
readCentrData R Documentation
Read imzML data
Description
A wrapper for MALDIquantForeign::importImzMl for reading centroided (i.e. processed)
and continuous imzML data. Note that to use this function, MALDIquantForeign has
to be installed separately, i.e. MALDIquantForeign is not installed automatically with
moleculaR.
Usage
readCentrData(path, verbose = FALSE, ...)
Arguments
path:
character string, path to the imzML file which should be read in.
verbose:
logical, verbose output?
...:
other arguments passed to MALDIquantForeign::importImzMl.
Value
A list of MALDIquant::MassPeaks objects if the input file is of 'processed' type.
CeMOS-Mannheim/moleculaR documentation built on April 14, 2025, 8:27 a.m.
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View source: R/readCentrData.R
| readCentrData | R Documentation |
Read imzML data
Description
A wrapper for MALDIquantForeign::importImzMl for reading centroided (i.e. processed)
and continuous imzML data. Note that to use this function, MALDIquantForeign has
to be installed separately, i.e. MALDIquantForeign is not installed automatically with
moleculaR.
Usage
readCentrData(path, verbose = FALSE, ...)
Arguments
path: |
character string, path to the imzML file which should be read in. |
verbose: |
logical, verbose output? |
...: |
other arguments passed to |
Value
A list of MALDIquant::MassPeaks objects if the input file is of 'processed' type.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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