geneParmEst: Gene level param estimates for density estimation

In CenterForStatistics-UGent/SPsimSeq: Semi-parametric simulation tool for bulk and single-cell RNA sequencing data

Gene level param estimates for density estimation

Description

Gene level param estimates for density estimation

Usage

geneParmEst(
  cpm.data.i,
  batch,
  group,
  prior.count = prior.count,
  de.ind,
  model.zero.prob,
  w
)

Arguments

cpm.data.i	full vector of genewise observation
batch, group	batch and grouping vectors
prior.count	the prior count for the cpm transofrm
de.ind	a boolean, is the gene to be DE?
model.zero.prob	a boolean, should zero-density be modelled?
w	weight

Value

list of density estimates

CenterForStatistics-UGent/SPsimSeq documentation built on Nov. 21, 2024, 6:30 a.m.