CenterForStatistics-UGent/SPsimSeq: Semi-parametric simulation for single cell and bulk RNA sequencing data

Using a specially designed exponential family for density estimation it constructs the distribution of gene expression from a given real RNA sequencing data (single and bulk). Subsequently, it simulates a new dataset from the estimated density. It allows simulation of multiple groups and batches with any required sample size and library size.

Getting started

Package details

Maintainer
LicenseGPL-2
Version1.0.0
URL https://github.com/CenterForStatistics-UGent/SPsimSeq
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("CenterForStatistics-UGent/SPsimSeq")
CenterForStatistics-UGent/SPsimSeq documentation built on June 20, 2019, 3:20 a.m.