estOff: Estimate the row/column parameters of the independence model

In CenterForStatistics-UGent/compIntegrate: Compositional omics model based visual integration

Estimate the row/column parameters of the independence model

Description

Estimate the row/column parameters of the independence model

Usage

estOff(
  data,
  distribution,
  rowOff,
  colOff,
  meanVarTrend,
  col,
  newtonRaphson,
  libSizes,
  ...
)

Arguments

data	a list of data matrices with the same number of samples n in the rows. Also phyloseq objects are acceptable
distribution	a character string describing which distributional assumption should be used.
rowOff, colOff	current row and column offset estimates
meanVarTrend	The estimated mean-variance trend
col	A logical, should column offsets be estimated
newtonRaphson	A boolean, should Newton-Raphson be used to solve the estimating equations
libSizes	The library sizes, used to evaluate the mean-variance trend
...	passed onto nleqslv

Value

The estimated marginal parameters

CenterForStatistics-UGent/compIntegrate documentation built on Aug. 4, 2023, 1:08 p.m.