GenMLVSBM | R Documentation |
Store all simulation parameters and list of fittedmodels. Methods for global inference and model selection are included.
nb_nodes
List of the umber of nodes for each levels
simulation_parameters
List of parameters of the MLVSBM
affiliation_matrix
Access the affiliation matrix
adjacency_matrix
Access the list of adjacency_matrix
memberships
Access the list of the clusterings
fittedmodels
Get the list of selected fitted FitMLVSBM objects
ICL
A summary table of selected fitted models and ICL model selection criterion
ICL_sbm
Summary table of ICL by levels
tmp_fittedmodels
A list of all fitted FitMLVSBM objects
fittedmodels_sbm
A list of selected fitted FitSBM objects of each levels
max_clusters
Access the list of maximum model size
min_clusters
Access the list of minimum model size
directed
Access the list of boolean for levels direction
directed
Access the list of the distribution used for each levels
nb_levels
Access the number of levels in the network
estimate_level()
GenMLVSBM$estimate_level( level = NULL, Q_min = 1, Q_max = 10, Z = NULL, init = "hierarchical", depth = 1, nb_cores = NULL )
estimate_sbm_neighbours()
GenMLVSBM$estimate_sbm_neighbours( level = NULL, Q = NULL, Q_min = 1, Q_max = 10, fit = NULL, nb_cores = NULL, init = NULL )
estimate_sbm_from_neighbours()
GenMLVSBM$estimate_sbm_from_neighbours( level = NULL, Q = NULL, fits = NULL, nb_cores = NULL )
estimate_sbm()
GenMLVSBM$estimate_sbm(level = NULL, Q = Q, Z = NULL, init = "hierarchical")
mcestimate()
GenMLVSBM$mcestimate(Q, Z = NULL, init = "hierarchical", independent = FALSE)
estimate_neighbours()
GenMLVSBM$estimate_neighbours( level, fit = NULL, Q, independent = independent, nb_cores = NULL )
estimate_one()
GenMLVSBM$estimate_one( Q, Z = NULL, independent = FALSE, init = "hierarchical", nb_cores = NULL )
estimate_all_bm()
GenMLVSBM$estimate_all_bm( Q = NULL, Z = NULL, independent = FALSE, clear = TRUE, nb_cores = NULL )
new()
Constructor for R6 class MLVSBM
GenMLVSBM$new( n = NULL, X = NULL, A = NULL, L = NULL, Z = NULL, directed = NULL, sim_param = NULL, distribution = NULL )
n
A list of size 2, the number of nodes
X
A list of L adjacency matrices
A
A list of L-1 affiliation matrices
Z
A list of L vectors, the blocks membership
directed
A vector of L booleans
sim_param
A list of MLVSBM parameters for simulating networks
distribution
The distributions of the interactions ("bernoulli")
A MLVSBM object
findmodel()
Find a fitted model of a given size
GenMLVSBM$findmodel(nb_clusters = NA, fit = NA)
nb_clusters
A list of the size of the model
fit
if fit = "best" return the best model according to the ICL
A FitMLVSBM object
clearmodels()
delete all fitted models
GenMLVSBM$clearmodels()
addmodel()
Added a FitMLVSBM object to the list of fitted model
GenMLVSBM$addmodel(fit)
fit
The FitMLVSBM object to be added
simulate()
GenMLVSBM$simulate()
clone()
The objects of this class are cloneable with this method.
GenMLVSBM$clone(deep = FALSE)
deep
Whether to make a deep clone.
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