pickingPeaks: pickingPeaks

In ChemoSens/PTRMSR: Analysis of PTRMS data

pickingPeaks

Description

pickingPeaks

Usage

pickingPeaks(
  df,
  col = "mz",
  signalPercentage = 10,
  nPoints = 0,
  refineMz = "descendPeak",
  method = "MAD"
)

Arguments

df	a dataframe containing two columns: "mz" and "intensity" corresponding respectively to abscissa and ordinates.
col	name of the column containing the abscissa ("mz" by default)
signalPercentage	of the centroid's intensity are used to calculate the refined m/z. By default the descend is stopped when the first signal that is equal or larger than the last observed one is encountered.
nPoints	n points required for smoothing (see sgolayfilt)
refineMz	"descendPeak" (see MSn base::pickPeaks)
method	"MAD"

ChemoSens/PTRMSR documentation built on June 15, 2025, 10:40 a.m.