Description Usage Arguments Value Author(s) References Examples

We used a phylogenetic tree of OTUs from a real throat microbiome data set, which consists of 856 OTUs after discarding singleton OTUs. Then based on a complicate statistical meodel, we generated the OTU counts for each individual to simulate the feature of real microbiome data.

1 | ```
simulateData(nSam=100, s=12, ncluster = 20, mu = 1000, size = 25)
``` |

`nSam` |
Sample size, the default value is 100. |

`s` |
The indicator of informative cluster. |

`ncluster` |
Positive integer specifying the number of clusters of they phylogenetic tree. |

`mu` |
The mean of the negative binomial distribution. |

`size` |
The size of the negative binomial distribution |

A list object, including the informative OTU counts table and whole OTU counts table.

Chong Wu

Chong, W., Pan, W. (2015) An Adaptive Association Test for Microbiome Data, submitted.

1 2 | ```
OTU = simulateData()
OTU
``` |

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