summary.cytoglmm: Extact and calculate p-values of GLMM fit

In ChristofSeiler/CytoGLMM: Conditional Differential Analysis for Flow and Mass Cytometry Experiments

Extact and calculate p-values of GLMM fit

Description

Extact and calculate p-values of GLMM fit

Usage

## S3 method for class 'cytoglmm'
summary(object, method = "BH", ...)

Arguments

object	A cytoglmm class
method	Multiple comparison adjustment method
...	Other parameters

Value

tibble data frame

Examples

set.seed(23)
df = generate_data()
protein_names = names(df)[3:12]
df = dplyr::mutate_at(df, protein_names, function(x) asinh(x/5))
glmm_fit = CytoGLMM::cytoglmm(df,
                              protein_names = protein_names,
                              condition = "condition",
                              group = "donor")
summary(glmm_fit)

ChristofSeiler/CytoGLMM documentation built on April 21, 2023, 3:38 a.m.