Cibiv/gwpcR: Amplification+Sequencing Model Based on a Galton-Watson Branching Process and Poissonian Sampling

Implements the necessary distributions and parameter estimation procedures for a model of amplification and high-throughput sequencing. The model is based on a mechanistic model of PCR amplification as a Galton-Watson branching process, and on Poissonian sampling to model high-throughput sequencing.

Getting started

Package details

AuthorFlorian G. Pflug
MaintainerFlorian G. Pflug <florian.pflug@univie.ac.at>
LicenseAGPL (>=3)
Version1.0.4
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("Cibiv/gwpcR")
Cibiv/gwpcR documentation built on Aug. 31, 2021, 1:20 p.m.