Files in CogDisResLab/BioPathNet
BioPathNet: Three Pod Analysis System
.Rbuildignore
.Rprofile
.github/.gitignore
.github/workflows/R-CMD-check.yaml
.gitignore
BioPathNet.Rproj
DESCRIPTION
LICENSE.md
NAMESPACE
R/BPNList.R
R/EnrichRResult.R
R/GSEAResult.R
R/LEResult.R
R/S4methods.R
R/classes.R
R/data.R
R/do_enrichr_pod.R
R/do_gsea_pod.R
R/do_leading_pod.R
R/get_revigo_output.R
R/prepare_data.R
README.Rmd
README.md
data-raw/hsapiens.R
data-raw/mmusculus.R
data-raw/rnorvegicus.R
data/hsapiens.rda
data/mmusculus.rda
data/rnorvegicus.rda
inst/CITATION
inst/java/RevigoStandalone.jar
inst/java/lib/mdsj.jar
inst/java/lib/weka.jar
man/BPNList-class.Rd
man/BPNList.Rd
man/EnrichRResult-class.Rd
man/EnrichRResult.Rd
man/GSEAResult-class.Rd
man/GSEAResult.Rd
man/IntegratedResult-class.Rd
man/LEResult-class.Rd
man/LEResult.Rd
man/RevigoResult-class.Rd
man/do_enrichr_pod.Rd
man/do_gsea_pod.Rd
man/do_leading_pod.Rd
man/get_revigo_output.Rd
man/hsapiens.Rd
man/iLINCSResult-class.Rd
man/leading_edge.Rd
man/load_pathways.Rd
man/mmusculus.Rd
man/prepare_data.Rd
man/rnorvegicus.Rd
renv.lock
renv/.gitignore
renv/activate.R
renv/settings.dcf
tests/testthat.R
tests/testthat/test-get_revigo_output.R
tests/testthat/test-prepare_data.R
