Files in Como-DTC-Collaboration/como-models
A Suite of CoMo Models
.Rbuildignore
.github/.gitignore
.github/pull_request_template.md
.github/workflows/coverage.yml
.github/workflows/lint.yaml
.github/workflows/pkgdown.yaml
.github/workflows/test_macos.yml
.github/workflows/test_ubuntu.yml
.github/workflows/test_windows.yml
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
R/SEIRD.R
R/SEIRDAge.R
R/SEIRDNPIAge.R
R/SEIRDV.R
R/SEIRDVAge.R
R/SEIRD_BD.R
R/SEIRD_CT.R
R/SEIRD_RU.R
R/SEIaImIsRD.R
R/SEmIRD.R
R/covid_transmission_parameters.R
R/data.R
R/generics.R
R/intervention.R
R/sysdata.rda
README.Rmd
README.md
_pkgdown.yml
codecov.yml
como-models.Rproj
data-raw/structures.R
data/agedemographics_by_country.rda
data/contact_all_rural.rda
data/contact_all_urban.rda
data/contact_home.rda
data/contact_other.rda
data/contact_school.rda
data/contact_work.rda
data/country_codetoname.rda
data/infection_fatality_ratio.rda
data/percentrural_by_country.rda
data/population.rda
man/InterventionParameters-class.Rd
man/R0.Rd
man/SEIRD-class.Rd
man/SEIRDAge-class.Rd
man/SEIRDNPIAge-class.Rd
man/SEIRDV-class.Rd
man/SEIRDVAge-class.Rd
man/SEIRD_BD-class.Rd
man/SEIRD_CT-class.Rd
man/SEIRD_RU-class.Rd
man/SEIaImIsRD-class.Rd
man/SEmIRD-class.Rd
man/SimulationParameters-class.Rd
man/agedemographics_by_country.Rd
man/check.Rd
man/contact_all_rural.Rd
man/contact_all_urban.Rd
man/contact_home.Rd
man/contact_other.Rd
man/contact_rates-set.Rd
man/contact_rates.Rd
man/contact_school.Rd
man/contact_work.Rd
man/country_codetoname.Rd
man/country_demog-set.Rd
man/country_demog.Rd
man/covid_transmission_parameters.Rd
man/figures/como-models-intro-white-background.png
man/figures/como-models-intro.png
man/fraction_rural.Rd
man/infection_fatality_ratio.Rd
man/initial_cases_deaths.Rd
man/initial_conditions-set.Rd
man/initial_conditions.Rd
man/intervention_parameters-set.Rd
man/intervention_parameters.Rd
man/intervention_protocol.Rd
man/interventions-set.Rd
man/interventions.Rd
man/ode_structure_diagram.Rd
man/percentrural_by_country.Rd
man/population.Rd
man/run.Rd
man/stack_intervention_coverages.Rd
man/tanh_coverage_smoother.Rd
man/transmission_parameters-set.Rd
man/transmission_parameters.Rd
tests/testthat.R
tests/testthat/test-SEIRD.R
tests/testthat/test-SEIRDV.R
tests/testthat/test-SEIRDVAge.R
tests/testthat/test-SEIRD_BD.R
tests/testthat/test-SEIRD_CT.R
tests/testthat/test-SEIaImIsRD.R
tests/testthat/test-SEmIRD.R
tests/testthat/test-covid_transmission_parameters.R
tests/testthat/test-interventions.R
tests/testthat/test_SEIRDAge.R
tests/testthat/test_SEIRDNPIAge.R
tests/testthat/test_SEIRD_RU.R
tests/testthat/testing_data/agedemographics_by_country.rdata
tests/testthat/testing_data/contact_all_rural.rdata
tests/testthat/testing_data/contact_all_urban.rdata
tests/testthat/testing_data/country_codetoname.rdata
tests/testthat/testing_data/percentrural_by_country.rdata
vignettes/.gitignore
vignettes/SEIRD.Rmd
vignettes/SEIRDNPIAge.Rmd
vignettes/SEIRDV.Rmd
vignettes/SEIRDVAge.Rmd
vignettes/SEIRD_BD.Rmd
vignettes/SEIRD_CT.Rmd
vignettes/SEIRD_age_structured.Rmd
vignettes/SEIRD_rural_urban.Rmd
vignettes/SEIaImIsRD.Rmd
vignettes/SEmIRD.Rmd
vignettes/images/seird_ct.png
vignettes/images/seird_ct_full.png
vignettes/references.bib
