annotateRegions: Annotate regions

In ComputationalRegulatoryGenomicsICL/GenomicInteractions: Utilities for handling genomic interaction data

Annotate regions

Description

Use this function to add metadata parallel to the 'regions' slot of a GenomicInteractions or GInteractions object.

Usage

annotateRegions(GIObject, name, dat)

## S4 method for signature 'GInteractions,character,vector'
annotateRegions(GIObject, name, dat)

Arguments

GIObject	A GenomicInteractions or GInteractions object
name	Character. Will be used as a column name.
dat	Vector of the same length as the GInteractions object, containing data with which to annotate the object.

Value

invisible(1)

Examples

data(hic_example_data)
chip <- runif(n = length(regions(hic_example_data)), max = 1000)
annotateRegions(hic_example_data, 'chip', chip)

ComputationalRegulatoryGenomicsICL/GenomicInteractions documentation built on April 16, 2022, 4:09 a.m.