Files in DHLab-CGU/emr
An analysis tool for diagnosis and procedure records

.RData
.Rbuildignore
.Rhistory
.Rproj.user/D27C7320/console06/INDEX001
.Rproj.user/D27C7320/cpp-definition-cache
.Rproj.user/D27C7320/pcs/files-pane.pper
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.Rproj.user/D27C7320/rmd-outputs
.Rproj.user/D27C7320/saved_source_markers
.Rproj.user/D27C7320/sources/per/t/1AE48BB
.Rproj.user/D27C7320/sources/per/t/1AE48BB-contents
.Rproj.user/D27C7320/sources/per/t/4FCE6227
.Rproj.user/D27C7320/sources/per/t/4FCE6227-contents
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.Rproj.user/D27C7320/sources/prop/INDEX
.Rproj.user/shared/notebooks/patch-chunk-names
.gitattributes
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
R/data_emr.R R/fun_emr.R R/getConditionEra.R R/getEligiblePeriod.R R/groupMethodSelect.R R/groupedDataLongToWide.R R/icdDxDecimalToShort.R R/icdDxShortToDecimal.R R/icdDxToCCS.R R/icdDxToCCSLvl.R R/icdDxToCCSR.R R/icdDxToComorbid.R R/icdDxToCustom.R R/icdDxToCustomGrep.R R/icdDxToPheWAS.R R/icdPrDecimalToShort.R R/icdPrShortToDecimal.R R/icdPrToCCS.R R/icdPrToCCSLvl.R R/icdPrToProcedureClass.R R/plotDiagCat.R R/plotICDError.R R/selectCases.R R/splitDataByDate.R README.Rmd README.md
README_files/figure-gfm/unnamed-chunk-2-1.png
README_files/figure-gfm/unnamed-chunk-2-2.png
Supplement.md Supplement.rmd
Supplement_files/figure-markdown_strict/unnamed-chunk-13-1.png
Supplement_files/figure-markdown_strict/unnamed-chunk-2-1.png
Supplement_files/figure-markdown_strict/unnamed-chunk-2-2.png
_pkgdown.yml
data/ICD10DxwithTwoFormat.rda
data/ICD9DxwithTwoFormat.rda
data/ICD9PrwithTwoFormat.rda
data/ccsDxICD10.rda
data/ccsDxICD9.rda
data/ccsPrICD10.rda
data/ccsPrICD9.rda
data/ccsrDxSingle.rda
data/icd10_ahrq.rda
data/icd10_charlson.rda
data/icd10_elix.rda
data/icd9_ahrq.rda
data/icd9_charlson.rda
data/icd9_elix.rda
data/pcICD10.rda
data/pcICD9.rda
data/phecode_icd10.rda
data/phecode_icd9_2.rda
data/prICD10.rda
data/sampleDxFile.rda
data/sampleMIMICIII.rda
data/samplePrFile.rda
docs/404.html
docs/LICENSE-text.html
docs/README_files/figure-gfm/unnamed-chunk-2-1.png
docs/README_files/figure-gfm/unnamed-chunk-2-2.png
docs/Supplement.html
docs/articles/Chi_Diagnosis.html
docs/articles/Chi_Diagnosis_files/header-attrs-2.10/header-attrs.js
docs/articles/Chi_Procedure.html
docs/articles/Chi_Procedure_files/header-attrs-2.10/header-attrs.js
docs/articles/Eng_Diagnosis.html
docs/articles/Eng_Procedure.html
docs/articles/index.html
docs/authors.html
docs/bootstrap-toc.css
docs/bootstrap-toc.js
docs/docsearch.css
docs/docsearch.js
docs/index.html
docs/link.svg
docs/pkgdown.css
docs/pkgdown.js
docs/pkgdown.yml
docs/reference/Dx_dataset_classification.html
docs/reference/Dx_dataset_standardization.html
docs/reference/PC.html
docs/reference/Pr_dataset_classification.html
docs/reference/Pr_dataset_standardization.html
docs/reference/Rplot001.png
docs/reference/Rplot002.png
docs/reference/common_DxArg.html
docs/reference/common_PrArg.html
docs/reference/conditionEra.html
docs/reference/dataSplit.html
docs/reference/dataWide.html
docs/reference/diagnosis_dataset_classification.html
docs/reference/diagnosis_dataset_standardization.html
docs/reference/dxCCS.html
docs/reference/dxCCSR.html
docs/reference/dxComorbid.html
docs/reference/dxCustom.html
docs/reference/dxPheWAS.html
docs/reference/dxUniform.html
docs/reference/dxpr-package.html
docs/reference/eligiblePeriod.html
docs/reference/emr-package.html
docs/reference/era.html
docs/reference/getConditionEra.html
docs/reference/getEligiblePeriod.html
docs/reference/groupMethodSelect.html
docs/reference/groupedDataLongToWide.html
docs/reference/index.html
docs/reference/plotDiagCat-1.png
docs/reference/plotDiagCat-2.png
docs/reference/plotDiagCat.html
docs/reference/plotError-1.png
docs/reference/plotError-2.png
docs/reference/plotError.html
docs/reference/plotGroupedData.html
docs/reference/plotICDError-1.png
docs/reference/plotICDError-2.png
docs/reference/plotICDError.html
docs/reference/prCCS.html
docs/reference/prUniform.html
docs/reference/procedure_dataset_classification.html
docs/reference/procedure_dataset_standardization.html
docs/reference/sampleDxFile.html
docs/reference/sampleFile_MIMIC.html
docs/reference/sampleMIMICIII.html
docs/reference/samplePrFile.html
docs/reference/sample_MIMICIII.html
docs/reference/selectCases.html
docs/reference/splitDataByDate.html
docs/sitemap.xml
dxpr.Rproj
image/overview.png
image/plotDiagMult.png
image/plotDiagSing.png
image/plotICDError.png
image/warning.png
inst/CITATION
man/Dx_dataset_classification.Rd man/Dx_dataset_standardization.Rd man/PC.Rd man/Pr_dataset_classification.Rd man/Pr_dataset_standardization.Rd man/common_DxArg.Rd man/common_PrArg.Rd man/dxCCS.Rd man/dxCCSR.Rd man/dxComorbid.Rd man/dxCustom.Rd man/dxPheWAS.Rd man/dxUniform.Rd man/dxpr-package.Rd man/getConditionEra.Rd man/getEligiblePeriod.Rd man/groupMethodSelect.Rd man/groupedDataLongToWide.Rd man/plotDiagCat.Rd man/plotICDError.Rd man/prCCS.Rd man/prUniform.Rd man/sampleDxFile.Rd man/sampleMIMICIII.Rd man/samplePrFile.Rd man/selectCases.Rd man/splitDataByDate.Rd tests/testthat.R tests/testthat/test_integration.R tests/testthat/test_wrangling.R vignettes/Chi_Diagnosis.Rmd vignettes/Chi_Procedure.Rmd vignettes/Eng_Diagnosis.Rmd vignettes/Eng_Procedure.Rmd
DHLab-CGU/emr documentation built on Sept. 2, 2023, 9:16 p.m.