API for DKMS-LSL/HLAsim
Simulate allelic dropouts in HLA data
| Global functions | |
|---|---|
| EA | Source code |
| HLA | Man page Source code |
| HLAsim | Man page |
| HLAsim-package | Man page |
| LDID_checker | Source code |
| `!=.eag_allele` | Source code |
| `!=.eag_numbers` | Source code |
| `!=.rep_allele` | Source code |
| `%||%` | Source code |
| `==.eag_allele` | Source code |
| `==.eag_numbers` | Source code |
| `==.rep_allele` | Source code |
| `is.na.eag_numbers` | Source code |
| allele | Man page Source code |
| allele.eag_allele | Source code |
| allele.rep_allele | Source code |
| allele1 | Source code |
| allele2 | Source code |
| allele2string | Source code |
| at_least_two | Source code |
| burst_subtypes | Source code |
| cdfA | Man page |
| cdfB | Man page |
| check_hla_allele_tbl | Source code |
| clean_hla_data | Man page Source code |
| clean_testing_data | Source code |
| colon | Source code |
| comma | Source code |
| concentration | Man page |
| disambiguate_codes | Man page Source code |
| dkms_dna_concentration | Man page Source code |
| dna_version_id | Man page Source code |
| do_inject | Man page Source code |
| dpb1_eag1412 | Man page |
| dqb1 | Man page |
| dqb1_eag1412 | Man page |
| drb1 | Man page |
| drb1_eag1412 | Man page |
| eag_allele | Man page Source code |
| eag_numbers | Man page Source code |
| eag_status | Man page Source code |
| eag_table | Man page |
| eag_tables | Man page |
| encode_ambiguities | Man page Source code |
| error | Source code |
| errors | Man page Source code |
| exon | Man page Source code |
| exon.eag_numbers | Source code |
| expand_ambiguity_codes | Man page Source code |
| expand_genotype | Source code |
| expand_nmdp_lookup | Source code |
| expected_genotype_frequencies | Man page Source code |
| field1 | Source code |
| field2 | Source code |
| g_table | Man page Source code |
| gene | Man page Source code |
| gene.HLA | Source code |
| generate_g_lookup | Source code |
| generate_nmdp_lookup | Source code |
| geno_data | Man page |
| geno_table | Man page |
| get_nums | Source code |
| get_testdata | Man page Source code |
| gtf_table | Man page Source code |
| gtf_table.HLA | Man page |
| hla_allele_to_genotype | Source code |
| hla_burst | Source code |
| hla_collapse | Source code |
| hla_sort | Source code |
| ichunk | Source code |
| inject | Source code |
| inject_errors | Man page Source code |
| is.empty | Source code |
| is.genotype | Source code |
| is.heterozygous | Source code |
| is.hla | Source code |
| is.homozygous | Source code |
| is.na.eag_allele | Source code |
| is.na.rep_allele | Source code |
| is_ambiguous | Source code |
| is_empty | Source code |
| is_g_code | Source code |
| is_heterozygous | Source code |
| is_homozygous | Source code |
| is_nmdp | Source code |
| lookup_list | Man page Source code |
| lookup_table | Man page |
| loose_eag | Man page Source code |
| make_disambiguator | Man page Source code |
| make_encoder | Man page Source code |
| make_exon_getter | Source code |
| make_genotype_sampler | Man page Source code |
| make_mapper | Man page Source code |
| make_remapper | Man page Source code |
| make_test_instance | Man page |
| make_test_instance2 | Man page |
| map_eag_allele | Man page Source code |
| map_genotype_frequencies | Man page Source code |
| map_rep_allele | Man page Source code |
| mapper | Man page Source code |
| match_hla_gene | Source code |
| max_table | Source code |
| maybe_duplicated | Source code |
| maybe_exon_shuffling | Source code |
| merge_nmdp_subtypes | Source code |
| merge_subtypes | Source code |
| multinomial_coefficient | Source code |
| nextype_basis_id | Man page Source code |
| nmdp_table | Man page Source code |
| none_empty | Source code |
| nunique | Source code |
| print.HLA | Source code |
| print.eag_allele | Source code |
| print.eag_numbers | Source code |
| print.geno_table | Source code |
| print.mapper | Source code |
| print.nmdp_tbl | Source code |
| print.rep_allele | Source code |
| remap_g_code | Source code |
| remap_nmdp_code | Source code |
| remapper | Man page Source code |
| rep_allele | Man page Source code |
| sample_dna_concentration | Man page Source code |
| samples | Man page Source code |
| slash | Source code |
| starts_with | Source code |
| string2allele | Source code |
| strip_date | Source code |
| strip_field_four | Source code |
| strsplitN | Source code |
| summary.geno_table | Source code |
| valid_date | Source code |
| wrap | Source code |
