Description Usage Arguments Value See Also Examples
View source: R/modeling_tools.R
This funtion plots the output from fit_sncm
1 | plot_sncm_fit(spp.out, fill = NULL, title = NULL)
|
spp.out |
the output from |
fill |
(optional) can either be set to fit_class to color by prediction (default), or by a taxonomic level
available in |
title |
(optional) the title of the plot. |
This function returns a plot of the fit of the OTU table to sncm
1 2 3 4 | spp <- otu_table(ps)@.Data
spp.out <- fit_sncm(spp, pool=NULL, taxon=data.frame(tax_table(ps)))
p <- plot_sncm_fit(spp.out)
p <- plot_sncm_fit(spp.out = spp.out, fill_var = "fit_class", title_var = "Fit to Neutral Model")
|
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.