tests/testthat/test-testPPI.R
In DavisLaboratory/vissE: Visualising Set Enrichment Analysis Results
test_that("PPI network gets computed", {
library(msigdb)
data('hgsc')
ppihs = getIMEX("hs", version = "2022-02-03")
ppimm = getIMEX("mm", version = "2022-02-03")
grps = list('early' = 'HALLMARK_ESTROGEN_RESPONSE_EARLY', 'late' = 'HALLMARK_ESTROGEN_RESPONSE_LATE')
expect_s3_class(plotMsigPPI(ppihs, hgsc, grps), 'ggplot')
})
DavisLaboratory/vissE documentation built on Jan. 31, 2024, 5:02 a.m.
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test_that("PPI network gets computed", {
library(msigdb)
data('hgsc')
ppihs = getIMEX("hs", version = "2022-02-03")
ppimm = getIMEX("mm", version = "2022-02-03")
grps = list('early' = 'HALLMARK_ESTROGEN_RESPONSE_EARLY', 'late' = 'HALLMARK_ESTROGEN_RESPONSE_LATE')
expect_s3_class(plotMsigPPI(ppihs, hgsc, grps), 'ggplot')
})
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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